The detailed information of tRNA gene sequence


Sequence ID>W121023951
Genome IDAHBJ01000002
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesSAR86 cluster bacterium SAR86D [AHBJ]
Start position on genome 1468
End posion on genome 1392
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
acttatcttt
tRNA gene sequence 
GCGCCTGTAGCTCAGTTGGATAGAGTACTTGGCTTCGAACCAAGGGGTCGGGAGTTCGAA
TCTTCCCGGGCGCACCA
Downstream region at tRNA end position 
tgttgttaaa
Secondary structure (Cloverleaf model)
>W121023951	Arg	TCG
                   t      ACCA tgttgttaaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C C T T C     A
      T G A        A      | | + | |     G
    T       C T C G       G G G A G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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