The detailed information of tRNA gene sequence


Sequence ID>W121025319
Genome IDAHCD01000016
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas rubra ATCC 29570 [AHCD]
Start position on genome 10998
End posion on genome 10922
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tctttgcgcc
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTCGGTCGAAGGTTCGAA
TCCTTCCGGGTGCGCCA
Downstream region at tRNA end position 
ttttaaaatc
Secondary structure (Cloverleaf model)
>W121025319	Arg	TCT
                   c      GCCA ttttaaaatc
                     G - C
                     C - G
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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