The detailed information of tRNA gene sequence


Sequence ID>W1610000303
Genome IDAAVI01000010
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula DSM 5348 [AAVI]
Start position on genome 44470
End posion on genome 44546
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tgtatgacgg
tRNA gene sequence 
GGGCCCGTAGCTCAGCTAGGTAGAGCGGCGGGCTTTTAACCCGTAGGCCCCGGGTTCGAA
TCCCGGCGGGCCCGCTA
Downstream region at tRNA end position 
catcccccac
Secondary structure (Cloverleaf model)
>W1610000303	Lys	TTT
                   g      GCTA catcccccac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    T       C T C G       C C G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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