The detailed information of tRNA gene sequence


Sequence ID>W1610000309
Genome IDAAVI01000012
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula DSM 5348 [AAVI]
Start position on genome 22478
End posion on genome 22556
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
ctcataactt
tRNA gene sequence 
GCGGCCGTAGTCTAGCCTGGATTAGGACGCCTGCCTGCCACGCAGGAGGTCCCGGGTTCA
AATCCCGGCGGTCGCACCT
Downstream region at tRNA end position 
gttctccatt
Secondary structure (Cloverleaf model)
>W1610000309	Gly	GCC
                   t      ACCT gttctccatt
                     G - C
                     C - G
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    A T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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