The detailed information of tRNA gene sequence


Sequence ID>W1610000394
Genome IDAAXQ01000001
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga maquilingensis IC-167 [AAXQ]
Start position on genome 1017738
End posion on genome 1017815
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgttaactaa
tRNA gene sequence 
GCCCCGGTAGCTCAGCCTGGGTGGAGTGTCCGGCTCATAACCGGAAGGTCCCGGGTTCAA
ATCCCGGCCGGGGCATCA
Downstream region at tRNA end position 
gtgtgattta
Secondary structure (Cloverleaf model)
>W1610000394	Met	CAT
                   a      ATCA gtgtgattta
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         C T C G       C C G G G     C
  G         | | | +                 T T
  G         G A G T
    G T G          G     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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