The detailed information of tRNA gene sequence


Sequence ID>W1610000431
Genome IDAAZL01000001
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanococcus aeolicus Nankai-3 [AAZL]
Start position on genome 1508416
End posion on genome 1508329
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttaatttgt
tRNA gene sequence 
GCAGAGGTGGTCGAGCTTGGACTATGGCGCCGGACTTGAAATCCGGTGGAGCTTTGCTCC
GCAAGGGTTCAAATCCCTTCCTCTGCGCtt
Downstream region at tRNA end position 
tttattttag
Secondary structure (Cloverleaf model)
>W1610000431	Ser	TGA
                   t      GCtt tttattttag
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
    T C G A        G      | | | | |     A
  T         G C T G       A A G G G     C
  G         + | + |                 T T
  G         T G G C
    A C T A        G     TGGAGCTTTGCTCCGC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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