The detailed information of tRNA gene sequence


Sequence ID>W1610000642
Genome IDABSD01000006
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Aciduliprofundum boonei T469 [ABSD]
Start position on genome 118727
End posion on genome 118811
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
cgcaattaca
tRNA gene sequence
GCGGGGATGGCCGAGCGGTACGGCGATGGCCTGCTAAGCCATTGGGCTATTGCCCGCGGG
GGTTCAAATCCCCCTCCCCGCGCTA
Downstream region at tRNA end position
tttaatcttt
Secondary structure (Cloverleaf model)
>W1610000642	Ser	GCT
                   a      GCTA tttaatcttt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
        G A        G      | | | | |     A
      C     G C C G       G G G G G     C
      G     | | | |                 T T
      G     C G G C
        T A        G     TGGGCTATTGCCCGC
                    A - T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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