The detailed information of tRNA gene sequence


Sequence ID>W1610000643
Genome IDABSD01000006
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Aciduliprofundum boonei T469 [ABSD]
Start position on genome 116715
End posion on genome 116628
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccgttcctaa
tRNA gene sequence 
GCCGGGGTTGCCGAGTGGTAAGGCGCAGGCCTGGAGAGCCTGTACTCCGTTAAGGGGTGC
GAGGGTTCAAATCCCTCCCCCGGCGCTA
Downstream region at tRNA end position 
tgaatccatg
Secondary structure (Cloverleaf model)
>W1610000643	Ser	GGA
                   a      GCTA tgaatccatg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
        G A        T      | | | | |     A
      T     G C C G       G A G G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TACTCCGTTAAGGGGTGC
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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