The detailed information of tRNA gene sequence


Sequence ID>W1610001626
Genome IDADCA01000001
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus sp. FS406-22 [ADCA] FS406-22 [ADCA]
Start position on genome 238768
End posion on genome 238846
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gattgagaga
tRNA gene sequence 
AGCGGGGTAGGGTAGCCAGGTCCATCCCGCCGGGCTCATAACCCGGAGATCGGAGGTTCA
AATCCTCCCCCCGCTACTA
Downstream region at tRNA end position 
tttgtatatt
Secondary structure (Cloverleaf model)
>W1610001626	Met	CAT
                   a      ACTA tttgtatatt
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
    C C G A        A      | | | | |     A
  A         T G G G       G G A G G     C
  G           | | |                 T T
  G         T C C C
    T C C A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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