The detailed information of tRNA gene sequence


Sequence ID>W1610003610
Genome IDAGCX01000256
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalonotius sp. J07HN4 [AGCX]
Start position on genome 5736
End posion on genome 5820
Amino Acid Pseudo
Anticodon GAG
Upstream region at tRNA start position 
accacagcga
tRNA gene sequence 
GCGTGGGTAGCCAAGCTAGGCCAACGGCGCAGCGTTGAGGGCGCTGTCCTGTAGAGGTCC
AAGAGTTCAAATCTCTTCCCACGCAtcg
Downstream region at tRNA end position 
caggcggtcc
Secondary structure (Cloverleaf model)
>W1610003610	Pseudo	GAG
                   a      Atcg caggcggtcc
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     T T C T C     A
    T C G A        A      | | | | |     A
  A         A C C G       A A G A G     C
  G           | | |                 T T
  G         C G G C
    C C A A        G     TCCTGTAGAGGTCC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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