The detailed information of tRNA gene sequence


Sequence ID>W1610004881
Genome IDAHKP01000003
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanoplanus limicola DSM 2279 [AHKP]
Start position on genome 39835
End posion on genome 39747
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
aggtaattgT
tRNA gene sequence 
GCGAGAGTTGCCAAGCCTGGTCAAAGGCGATAGGTTCAGGGCCTATTCTCGTAGGAGTTC
GCAGGTTCGAATCCTGCCTCTCGCATCC
Downstream region at tRNA end position 
gtccgtcagg
Secondary structure (Cloverleaf model)
>W1610004881	Leu	CAG
                   T      ATCC gtccgtcagg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C G T C C     A
    C C G A        T      | | | | |     G
  T         A C C G       G C A G G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCTCGTAGGAGTTC
                    A - T
                    T - A
                    A - T
                    G - C
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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