The detailed information of tRNA gene sequence


Sequence ID>W1610004891
Genome IDAHKP01000004
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanoplanus limicola DSM 2279 [AHKP]
Start position on genome 309887
End posion on genome 309813
Amino Acid Pseudo
Anticodon GGG
Upstream region at tRNA start position 
attttgcacc
tRNA gene sequence 
GGGGCCATAGGGTAGCCTGGACCATCCTAGGAGACTGGGGGTCTTCTGACCCGCGTTCGA
ATCGCGGTGGCCCCAtat
Downstream region at tRNA end position 
ttttataaaa
Secondary structure (Cloverleaf model)
>W1610004891	Pseudo	GGG
                   c      Atat ttttataaaa
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     G G C G C     A
    C C G A        A      | | | | |     G
  T         T G G G       C C G C G     C
  G         | + | |                 T T
  G         A T C C
    A C C          T     CTGAC
                    A - T
                    G + T
                    G - C
                    A - T
                    G   G
                  A       G
                  C       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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