The detailed information of tRNA gene sequence


Sequence ID>W1610005323
Genome IDAJRK01000105
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalococcus hamelinensis 100A6 [AJRK]
Start position on genome 716
End posion on genome 787
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tcgggaatgc
tRNA gene sequence 
GGGCTCATAGATCAGTGGTAGATCGTTCCCTTGGCAGGGGAAAGGCCCCGGGTTCAAATC
CCGGTGAGTCCAtcg
Downstream region at tRNA end position 
gagcgagtcc
Secondary structure (Cloverleaf model)
>W1610005323	Ala	GGC
                   c      Atcg gagcgagtcc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     G G C C C     A
        G A        A      | | | | |     A
      T     C T A G       C C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    T - A
                    T - A
                    C - G
                    C - G
                    C - G
                  T       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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