The detailed information of tRNA gene sequence


Sequence ID>W1610011021
Genome IDAMPO01000008
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium formicicum DSM 3637 [AMPO]
Start position on genome 50264
End posion on genome 50191
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggcgcttaa
tRNA gene sequence 
GGGCCCATAGCTTAGCCAGGTAGAGCGCCCGGCTCATAACCGGGCGGCCATGGGTTCGAA
CCCCATTGGGCCCAttt
Downstream region at tRNA end position 
acctgtaaat
Secondary structure (Cloverleaf model)
>W1610011021	Met	CAT
                   a      Attt acctgtaaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          C A
                    T     T A C C C     A
      C G A        A      | | | | |     G
    C       T T C G       A T G G G     C
    A       + | | |                 T T
    G       G A G C
      G T A        G     CGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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