The detailed information of tRNA gene sequence


Sequence ID>W1610011784
Genome IDAOHT01000048
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogeometricum borinquense DSM 11551 [AOHT]
Start position on genome 55388
End posion on genome 55308
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccggattaga
tRNA gene sequence 
GCCGGGATGGCCGAGTGGTAAGGCGCACGCCTGGAAAGCGTGTTCCCTTTGGGATCCAGG
GTTCAAATCCCTGTCCCGGCGttt
Downstream region at tRNA end position 
ctctgcgaac
Secondary structure (Cloverleaf model)
>W1610011784	Ser	GGA
                   a      Gttt ctctgcgaac
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
        G A        G      | | | | |     A
      T     G C C G       C A G G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TTCCCTTTGGGATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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