The detailed information of tRNA gene sequence


Sequence ID>W1610012823
Genome IDAOIU01000031
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalosimplex carlsbadense 2002/9/1 [AOIU]
Start position on genome 250084
End posion on genome 250157
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gcctacctgc
tRNA gene sequence 
GCCAGGGGAGCTTGGGCGGTTCAAGCACTCGACTTGTAATCGAGATTCCCGGGGTTCAAA
TCCCTGCCCTGGCTtcg
Downstream region at tRNA end position 
atgcggtttc
Secondary structure (Cloverleaf model)
>W1610012823	Thr	TGT
                   c      Ttcg atgcggtttc
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    G     G T C C C     A
      G G G        A      | + | | |     A
    C       T T C G       C G G G G     C
    G       | | | |                 T T
    G       A A G C
      T T C        A     ATTCC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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