The detailed information of tRNA gene sequence


Sequence ID>W1610012849
Genome IDAOIV01000004
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogeometricum pallidum JCM 14848 [AOIV]
Start position on genome 18935
End posion on genome 18864
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aggctaacac
tRNA gene sequence 
GGGCCCGTAGCTCAGCGGCAGAGCACCTCCTTTGCAAGGAGGAAGCCCTGGGTTCAAATC
CCAGCGGGTCCAtct
Downstream region at tRNA end position 
aatcgcgaat
Secondary structure (Cloverleaf model)
>W1610012849	Ala	TGC
                   c      Atct aatcgcgaat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A C C C     A
        G A        A      | | | | |     A
      C     C T C G       C T G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     AAGCC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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