The detailed information of tRNA gene sequence


Sequence ID>W1610012869
Genome IDAOIV01000027
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogeometricum pallidum JCM 14848 [AOIV]
Start position on genome 98180
End posion on genome 98254
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aggacgaatc
tRNA gene sequence 
GGGCCCTTAGCTCAGTCTGGTTAGAGCGCTCGGCTCATAACCGAGTGGTCGATGGTTCGA
ATCCGTCAGGGCCCAtcg
Downstream region at tRNA end position 
ataaacccgc
Secondary structure (Cloverleaf model)
>W1610012869	Met	CAT
                   c      Atcg ataaacccgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C T G C C     A
    C T G A        A      | | + | |     G
  T         C T C G       G A T G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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