The detailed information of tRNA gene sequence


Sequence ID>W1610012874
Genome IDAOIV01000027
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogeometricum pallidum JCM 14848 [AOIV]
Start position on genome 82822
End posion on genome 82747
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttcgtgttgc
tRNA gene sequence 
GGGCTCGTGGTCTAGTGGTTATGACGCTTCCCTTACAAGGAAGAGATCGGTGGTTCGACT
CCGCCCGAGCCCACTA
Downstream region at tRNA end position 
caacccgtga
Secondary structure (Cloverleaf model)
>W1610012874	Val	TAC
                   c      ACTA caacccgtga
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T C
                    T     C C G C C     A
      T G A        G      | | + | |     G
    G       T C T G       G G T G G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGATC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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