The detailed information of tRNA gene sequence


Sequence ID>W1610013123
Genome IDAOJH01000061
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum kocurii JCM 14978 [AOJH]
Start position on genome 31832
End posion on genome 31761
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtatgagtgc
tRNA gene sequence 
GGGACCGTGGGTTAGTGGTATACTCCGGGCCTTGGGTGCCCGTGACCCCGGTTCGAATCC
GGGCGGTCCCACtt
Downstream region at tRNA end position 
tcgcgacgcg
Secondary structure (Cloverleaf model)
>W1610013123	Pro	TGG
                   c      ACtt tcgcgacgcg
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     G G G C C     A
        G A        G      | | | | |     G
      T     T T G G       C C C G G     C
      G       | | +                 T T
      G     T A C T
        T A        C     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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