The detailed information of tRNA gene sequence


Sequence ID>W1610013257
Genome IDAOJK01000041
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum californiense DSM 19288 [AOJK]
Start position on genome 106936
End posion on genome 107017
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
catcgggtga
tRNA gene sequence 
GCCAGGATGGCCGAGTGGTAAGGCGCACGCCTGGAAAGCGTGTTCCCATCCGGGATCGGG
GGTTCAAATCCCTCTCCTGGCGttt
Downstream region at tRNA end position 
tgctgtcgca
Secondary structure (Cloverleaf model)
>W1610013257	Ser	GGA
                   a      Gttt tgctgtcgca
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
        G A        G      | + | | |     A
      T     G C C G       G G G G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TTCCCATCCGGGATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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