The detailed information of tRNA gene sequence


Sequence ID>W1610013259
Genome IDAOJK01000041
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum californiense DSM 19288 [AOJK]
Start position on genome 62566
End posion on genome 62481
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtggaaccga
tRNA gene sequence 
GCCGAGGTAGCCTAGCCTGGCCAAGGCGGTAGATTCGAAATCTACTGTCCATTCGGACAC
CGGAGTTCAAATCTCCGCCTCGGCGCtt
Downstream region at tRNA end position 
ctctcagtcc
Secondary structure (Cloverleaf model)
>W1610013259	Ser	CGA
                   a      GCtt ctctcagtcc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G C C T C     A
    C C G A        A      | | | | |     A
  T         T C C G       C G G A G     C
  G         | | | |                 T T
  G         A G G C
    C C A          G     TGTCCATTCGGACAC
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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