The detailed information of tRNA gene sequence


Sequence ID>W1610014235
Genome IDAOLS01000072
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula californiae ATCC 33799 [AOLS]
Start position on genome 9083
End posion on genome 9158
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgactacagT
tRNA gene sequence 
GCCGACGTGGTGTAACTCGGCTAGCATACGGCCCTGTCGCGGTCGTGATCCGGGTTCGAA
TCCCGGCGTCGGCGTac
Downstream region at tRNA end position 
ccgggaggcg
Secondary structure (Cloverleaf model)
>W1610014235	Asp	GTC
                   T      GTac ccgggaggcg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     G G C C C     A
    T C A A        G      | | | | |     G
  C         T G T G       C C G G G     C
  G         + | | +                 T T
  G         G C A T
    C T A          A     TGAT
                    C - G
                    G - C
                    G + T
                    C - G
                    C - G
                  C       C
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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