The detailed information of tRNA gene sequence


Sequence ID>W1610014236
Genome IDAOLS01000072
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula californiae ATCC 33799 [AOLS]
Start position on genome 9464
End posion on genome 9538
Amino Acid Pseudo
Anticodon TGG
Upstream region at tRNA start position 
cagtctcccT
tRNA gene sequence 
GAGCCGATAGCCCAGTGGACGATGAGCTGTGCCTTGGGTGTACAGGACCGAGGTTCGAAT
CCTCGTCGGCTCAGtg
Downstream region at tRNA end position 
ggccgtgtct
Secondary structure (Cloverleaf model)
>W1610014236	Pseudo	TGG
                   T      AGtg ggccgtgtct
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     G C T C C     A
      T G A        A      | | | | |     G
    G       C C C G       C G A G G     C
    G         |                     T T
    A       T G A G
      C G A        C     GGAC
                    T - A
                    G - C
                    T - A
                    G + T
                    C - G
                  C       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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