The detailed information of tRNA gene sequence


Sequence ID>W1610014237
Genome IDAOLS01000072
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula californiae ATCC 33799 [AOLS]
Start position on genome 10252
End posion on genome 10334
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tcaacgttac
tRNA gene sequence 
GTCGCCGTACTCAAGTGGTCAACGGGAAGTGGCTCAGAACCGCTGGCGTAGGTCCTTCCG
AGGTTCGAATCCTCGCGGCGACAttt
Downstream region at tRNA end position 
ctccctgtag
Secondary structure (Cloverleaf model)
>W1610014237	Leu	CAG
                   c      Attt ctccctgtag
                     G - C
                     T - A
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C T C C     A
      T G A        A      | | | | |     G
    G       A C T C       C G A G G     C
    G         | + |                 T T
    T       C G G G
      C A A        A     GGCGTAGGTCCTTC
                    A - T
                    G - C
                    T + G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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