The detailed information of tRNA gene sequence


Sequence ID>W1610014488
Genome IDAOMB01000005
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalococcus hamelinensis 100A6 [AOMB]
Start position on genome 49518
End posion on genome 49446
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gttcgtgaac
tRNA gene sequence 
GGGCCCTTAGCTCAGTGGTGAGAGCGCTCGGCTCATAACCGAGTGGTCGTTGGTTCGAAT
CCGACAGGGCCCAtcc
Downstream region at tRNA end position 
gaaatctcag
Secondary structure (Cloverleaf model)
>W1610014488	Met	CAT
                   c      Atcc gaaatctcag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C A G C C     A
      T G A        A      | | + | |     G
    G       C T C G       G T T G G     C
    G       | | | |                 T T
    T       G A G C
      G A          G     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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