The detailed information of tRNA gene sequence


Sequence ID>W1610014578
Genome IDAOMD01000016
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalococcus saccharolyticus DSM 5350 [AOMD]
Start position on genome 42344
End posion on genome 42428
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gcgagcgcgt
tRNA gene sequence 
GCGAGGGTAGCCAAGTCTGGAAACGGCGGCGGATTCAAGCTCCGCTCCTGTAGAGGTCCA
CGGGTTCAAATCCTGTCCCTCGCACtg
Downstream region at tRNA end position 
cgtgccgtgc
Secondary structure (Cloverleaf model)
>W1610014578	Leu	CAA
                   t      ACtg cgtgccgtgc
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
    C T G A        A      | | + | |     A
  T         A C C G       A C G G G     C
  G           | | |                 T T
  G         C G G C
    A A A          G     TCCTGTAGAGGTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       C
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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