The detailed information of tRNA gene sequence


Sequence ID>W1610016183
Genome IDAOSH01000073
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SCGC AB-539-C06 [AOSH]
Start position on genome 2036
End posion on genome 2122
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttgcttttT
tRNA gene sequence 
GCCGAGGTGGCCCAGCCTGGAACGGCGCGAGACTGGAAATCTCGTGAGGCATTGCCTCTC
AGGAGTTCAAATCTCCTCCTCGGCGTac
Downstream region at tRNA end position 
cattcaaaag
Secondary structure (Cloverleaf model)
>W1610016183	Ser	GGA
                   T      GTac cattcaaaag
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T C C T C     A
      C G A        G      | | | | |     A
    C       C C C G       A G G A G     C
    T         | | |                 T T
    G       C G G C
      G A A        G     TGAGGCATTGCCTCTC
                    C - G
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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