The detailed information of tRNA gene sequence


Sequence ID>W1610016187
Genome IDAOSI01000013
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SCGC AB-540-F20 [AOSI]
Start position on genome 20568
End posion on genome 20644
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ttttaaaatt
tRNA gene sequence 
GGGCCCATGAGGTAGTCTGGATATCCTACTGGCCTTCGGAGCCGGTTACCGGGGTTCGAA
TCCCCGTGGGTCCGCTA
Downstream region at tRNA end position 
tcatctctcg
Secondary structure (Cloverleaf model)
>W1610016187	Arg	TCG
                   t      GCTA tcatctctcg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G C C C C     A
    C T G A        G      | | | | |     G
  T         T G G A       C G G G G     C
  G           | | |                 T T
  G         T C C T
    A T A          A     TTAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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