The detailed information of tRNA gene sequence


Sequence ID>W1610016190
Genome IDAOSI01000048
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SCGC AB-540-F20 [AOSI]
Start position on genome 900
End posion on genome 976
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
aacgatagca
tRNA gene sequence 
GGATCTGTAGTGTAGCTTGGATATCACAGGGGCTTCCGGAGCCTCTGACTCGGGTTCGAA
TCCCGGCAGATCCGCTA
Downstream region at tRNA end position 
tttcttaaca
Secondary structure (Cloverleaf model)
>W1610016190	Arg	CCG
                   a      GCTA tttcttaaca
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     G G C C C     A
    T C G A        A      + | | | |     G
  T         T G T G       T C G G G     C
  G           | | |                 T T
  G         T C A C
    A T A          A     TGAC
                    G - C
                    G + T
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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