The detailed information of tRNA gene sequence


Sequence ID>W1610016197
Genome IDAOSI01000169
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SCGC AB-540-F20 [AOSI]
Start position on genome 2872
End posion on genome 2946
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
catacctaat
tRNA gene sequence 
GGGCTTGTAGATCAGCTCGGAAGATCGCCTCCTTGGCATGGAGGAGGCCTCGGGTTCAAA
TCCCGACAAGTCCACtc
Downstream region at tRNA end position 
attatttttt
Secondary structure (Cloverleaf model)
>W1610016197	Ala	GGC
                   t      ACtc attatttttt
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     A G C C C     A
      C G A        A      | | | | |     A
    T       C T A G       T C G G G     C
    C       | | | |                 T T
    G       G A T C
      G A A        G     AGGCC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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