The detailed information of tRNA gene sequence


Sequence ID>W1610019092
Genome IDARPX01000184
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloquadratum walsbyi J07HQW1 [ARPX]
Start position on genome 22306
End posion on genome 22228
Amino Acid Pseudo
Anticodon CTC
Upstream region at tRNA start position 
gtgtaggcaT
tRNA gene sequence 
GCTCCGTTGGTGTAGTCCGGCCAATCATCTTGCCCTCTCACGGCAAGGACTTGGGTTCAA
ATCCCAAACGGAGCATCA
Downstream region at tRNA end position 
caattcaagt
Secondary structure (Cloverleaf model)
>W1610019092	Pseudo	CTC
                   T      ATCA caattcaagt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     A A C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       T T G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        C     GGAC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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