The detailed information of tRNA gene sequence


Sequence ID>W1610019178
Genome IDARPZ01000178
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloquadratum sp. J07HQX50 [ARPZ]
Start position on genome 3608
End posion on genome 3694
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctgccattgt
tRNA gene sequence 
GGTGGGATGGCGGAGTGGACTAACGCGCCTGCCTTGAGAGCAGGTGGCCTTACGGCCTCC
TGGGTTCAAATCCCAGTCCCACCGCCA
Downstream region at tRNA end position 
ctttctattg
Secondary structure (Cloverleaf model)
>W1610019178	Ser	TGA
                   t      GCCA ctttctattg
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      T G A        G      | | | | |     A
    G       G G C G       C T G G G     C
    G         | | |                 T T
    A       A C G C
      C T A        G     TGGCCTTACGGCCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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