The detailed information of tRNA gene sequence


Sequence ID>W1610019189
Genome IDARPZ01000535
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloquadratum sp. J07HQX50 [ARPZ]
Start position on genome 2665
End posion on genome 2737
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cacaaataat
tRNA gene sequence 
GCCGGTGTAGCTCAGCTGGGAGAGCGGTTCCTTTGTAAGGAATAGGTCGAGAGTTCAAAT
CTCTCCACCGGCTtac
Downstream region at tRNA end position 
atacaaaggg
Secondary structure (Cloverleaf model)
>W1610019189	Thr	TGT
                   t      Ttac atacaaaggg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      C G A        A      | | | | |     A
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    G + T
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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