The detailed information of tRNA gene sequence


Sequence ID>W1610020542
Genome IDASMQ01000006
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Aenigmarchaeum subterraneum subterraneum SCGC AAA011-O16 [ASMQ]
Start position on genome 39942
End posion on genome 39868
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tctacattgt
tRNA gene sequence 
GGCTCGGTAGTATAGCGGTTAGTATGACGGTTTGTCGAATCGTCGACACGGGTTCGAATC
CCGTCCGGGCCGCCT
Downstream region at tRNA end position 
catgtttatg
Secondary structure (Cloverleaf model)
>W1610020542	Asp	GTC
                   t      GCCT catgtttatg
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        A      | | | | |     G
    G       T A T G       A C G G G     C
    G       + | | +                 T T
    T       G T A T
      T A          G     CGAC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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