The detailed information of tRNA gene sequence


Sequence ID>W1610020564
Genome IDASMS01000025
Search identical group
Phylum/ClassUnclassified
SpeciesDiapherotrites archaeon SCGC AAA011-N19 [ASMS]
Start position on genome 310
End posion on genome 237
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tattcatcca
tRNA gene sequence 
GGGCCCCTAGCTTAGCCTGGTAGAGCGCCTCGTTTGCAACGAGGAGGTCACGGGTTCAAC
TCCCGTGGGGTCCAtcg
Downstream region at tRNA end position 
gtccattttc
Secondary structure (Cloverleaf model)
>W1610020564	Ala	TGC
                   a      Atcg gtccattttc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G          T C
                    T     T G C C C     A
      C G A        A      | | | | |     A
    C       T T C G       A C G G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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