The detailed information of tRNA gene sequence


Sequence ID>W1610024424
Genome IDAUMX01000007
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocorpusculum bavaricum DSM 4179 [AUMX]
Start position on genome 48423
End posion on genome 48495
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ctttttgtat
tRNA gene sequence 
GGATTCGTGGTCTAGTGGTATGACGTCGCCTTCACACGGCGAAGGTCAGGAGTTCGAATC
TCCTCGGATCCACtg
Downstream region at tRNA end position 
ttgtcttttt
Secondary structure (Cloverleaf model)
>W1610024424	Val	CAC
                   t      ACtg ttgtcttttt
                     G - C
                     G - C
                     A - T
                     T - A
                     T + G
                     C - G
                     G - C          T A
                    T     T C C T C     A
        G A        G      | | | | |     G
      T     T C T G       A G G A G     C
      G       | | |                 T T
      G     T G A C
        T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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