The detailed information of tRNA gene sequence


Sequence ID>W1610030028
Genome IDAYGT01000067
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNanohaloarchaea archaeon AB578-D14 [AYGT]
Start position on genome 1340
End posion on genome 1264
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tttcgggtgc
tRNA gene sequence 
GGGCCGATAGTTCAGCCTGGCAGAACACCTCCTTGGCATGGAGGAGGCCCTGGGTTCAAA
TCCCAGTCGGTCCACAA
Downstream region at tRNA end position 
cccttatgca
Secondary structure (Cloverleaf model)
>W1610030028	Ala	GGC
                   c      ACAA cccttatgca
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     G A C C C     A
      C G A        A      | | | | |     A
    C       C T T G       C T G G G     C
    T       | | | |                 T T
    G       G A A C
      G C A        A     AGGCC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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