The detailed information of tRNA gene sequence


Sequence ID>W1610030030
Genome IDAYGT01000177
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNanohaloarchaea archaeon AB578-D14 [AYGT]
Start position on genome 625
End posion on genome 551
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tttttgcttt
tRNA gene sequence 
GGGCTCTTAGTTCAGTGGCAGAACGTCTGCTTCGCAAGCAGAAGGCCCCGGGTTCAAATC
CCGGAGAGTCCACTA
Downstream region at tRNA end position 
ccacccggtg
Secondary structure (Cloverleaf model)
>W1610030030	Ala	CGC
                   t      ACTA ccacccggtg
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     T - A          T A
                    T     G G C C C     A
        G A        A      | | | | |     A
      T     C T T G       C C G G G     C
      G     | | | |                 T T
      G     G A A C
        C A        G     AGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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