The detailed information of tRNA gene sequence


Sequence ID>W1610040563
Genome IDBAFM01000019
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalococcus agarilyticus 197A [BAFM]
Start position on genome 8923
End posion on genome 9001
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
acgagagagT
tRNA gene sequence 
AGCGGGATAGGATAGCCAGGAGATTCCGGCGGGCTCATAACCCGCAGACCGGTAGTTCAA
ATCTACCTCCCGCTATCC
Downstream region at tRNA end position 
caccttttgc
Secondary structure (Cloverleaf model)
>W1610040563	Pseudo	CAT
                   T      ATCC caccttttgc
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C A T C     A
    C C G A        A      | | | | |     A
  A         T A G G       G G T A G     C
  G           | | |                 T T
  G         T T C C
    A G A          G     AGACC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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