The detailed information of tRNA gene sequence


Sequence ID>W1610041516
Genome IDBATA01000001
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalarchaeum acidiphilum MH1-52-1 JCM 16109 [BATA]
Start position on genome 93320
End posion on genome 93244
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
acgagtcggT
tRNA gene sequence 
AGGCACGTAGCTCAGCTCGGATAGAGCGTCTGGCTTCTAACCAGAAGCGCGGGGGTTCGA
ATCCCTCCGTGCCCGTtt
Downstream region at tRNA end position 
ctgtcgcgag
Secondary structure (Cloverleaf model)
>W1610041516	Arg	TCT
                   T      GTtt ctgtcgcgag
                     A   C
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
    T C G A        A      | + | | |     G
  C         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    A T A          G     AGCGC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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