The detailed information of tRNA gene sequence


Sequence ID>W1610041517
Genome IDBATA01000002
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalarchaeum acidiphilum MH1-52-1 JCM 16109 [BATA]
Start position on genome 39887
End posion on genome 39972
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
cgaagtgcgc
tRNA gene sequence 
GCGAGGGTAGCCAAGCTCGGCCAACGGCGACGGACTCAAGATCCGTTCCTGTAGAGGTTC
GAGGGTTCGAATCCCTTCCCTCGCACgt
Downstream region at tRNA end position 
tcagggcgtc
Secondary structure (Cloverleaf model)
>W1610041517	Leu	CAA
                   c      ACgt tcagggcgtc
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
    T C G A        A      + | | | |     G
  C         A C C G       G A G G G     C
  G           | | |                 T T
  G         C G G C
    C C A A        G     TCCTGTAGAGGTTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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