The detailed information of tRNA gene sequence


Sequence ID>W1610041520
Genome IDBATA01000003
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalarchaeum acidiphilum MH1-52-1 JCM 16109 [BATA]
Start position on genome 13745
End posion on genome 13661
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccatcacgC
tRNA gene sequence 
GGTGAGGTGGCGGAGCGGCCTATCGCGCCGGTCTTGAAAACCGGTGGCATTCAGCCTCCT
GGGTTCGAATCCCAGCCTCACCGTtt
Downstream region at tRNA end position 
ctgtcgaaca
Secondary structure (Cloverleaf model)
>W1610041520	Ser	TGA
                   C      GTtt ctgtcgaaca
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G A C C C     A
      C G A        G      | | | | |     G
    G       G G C G       C T G G G     C
    G       + | | |                 T T
    C       T C G C
      C T A        G     TGGCATTCAGCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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