The detailed information of tRNA gene sequence


Sequence ID>W1610041542
Genome IDBATA01000049
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalarchaeum acidiphilum MH1-52-1 JCM 16109 [BATA]
Start position on genome 18305
End posion on genome 18378
Amino Acid Pseudo
Anticodon GGG
Upstream region at tRNA start position 
tcccgagtgc
tRNA gene sequence 
GGGGCCGTGGGGTAGCTTGGTATCCTCGGCGGATGGGGTCCGTCGGACTTGAGTTCGAAT
CTCAACGGTCCCACtc
Downstream region at tRNA end position 
tcactttcga
Secondary structure (Cloverleaf model)
>W1610041542	Pseudo	GGG
                   c      ACtc tcactttcga
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C          T A
                    T     A A C T C     A
      C G A        G      | | | | |     G
    T       T G G G       T T G A G     C
    T         | | +                 T T
    G       T C C T
      G T A        C     GGAC
                    G - C
                    G + T
                    C - G
                    G - C
                    G - C
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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