The detailed information of tRNA gene sequence


Sequence ID>W1610045172
Genome IDBBBE01000007
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus peptonophilus JCM 9653 [BBBE]
Start position on genome 5833
End posion on genome 5753
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
agcgggcagt
tRNA gene sequence 
GGACCGGTAGCCTAGCCAGGATAGGGCGGCGGCCTCCTAAGCCGCAGGTCCGGGGGGGTT
CGAAGCCCCGCCGGTCCGCCA
Downstream region at tRNA end position 
caaaacttct
Secondary structure (Cloverleaf model)
>W1610045172	Arg	CCT
                   t      GCCA caaaacttct
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          G A
                    T     G C C C C     A
    C C G A        A        | | | |     G
  A         T C C G       G G G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          G     AGGTCCGG
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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