The detailed information of tRNA gene sequence


Sequence ID>W1610046881
Genome IDBBCW01000007
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina horonobensis HB-1 = JCM 15518 [BBCW]
Start position on genome 9777
End posion on genome 9702
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cctgatatcT
tRNA gene sequence 
GGGCCCGTAGCTTAGCCTGGTGGAGCGCACGGCTGATAACCGTGAGGTCCTGCGTTCGAA
TCGCAGCGGGCCCATat
Downstream region at tRNA end position 
acttttctta
Secondary structure (Cloverleaf model)
>W1610046881	Ile	GAT
                   T      ATat acttttctta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A C G C     A
      C G A        A      | | | | |     G
    C       T T C G       C T G C G     C
    T       + | | |                 T T
    G       G A G C
      G T G        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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