The detailed information of tRNA gene sequence


Sequence ID>W1610047705
Genome IDBBDO01000004
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta sp. JCM 16161 [BBDO]
Start position on genome 177081
End posion on genome 177158
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tgactaacga
tRNA gene sequence 
GCCCCGGTCGTATAGCCCGGTCAAGTATGCGGGCCTCTCGAGCCCGTGACCCGGGTTCAA
ATCCCGGCCGGGGCACCA
Downstream region at tRNA end position 
cggtcttcgt
Secondary structure (Cloverleaf model)
>W1610047705	Glu	CTC
                   a      ACCA cggtcttcgt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        C      | | | | |     A
  C         T A T G       C C G G G     C
  G         + | | +                 T T
  G         G T A T
    T C A A        G     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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