The detailed information of tRNA gene sequence


Sequence ID>W1610072185
Genome IDBCUT01000001
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus NBRC 15149 [BCUT]
Start position on genome 1343035
End posion on genome 1343119
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttccggatgt
tRNA gene sequence 
GCCCGGGTGGTGAAATTGGTAGACGCAGGGGACTCAAAATCCCCCACCGAAAGGTGTGCC
GGTTCGATTCCGGCCCCGGGCACCA
Downstream region at tRNA end position 
ccccctcccc
Secondary structure (Cloverleaf model)
>W1610072185	Leu	CAA
                   t      ACCA ccccctcccc
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T T
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       A G T G       G C C G G     C
    G         | + |                 T T
    G       A C G C
      T A G        A     CACCGAAAGGTGT
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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