The detailed information of tRNA gene sequence


Sequence ID>W1610081494
Genome IDBDDO01000010
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPaenirhodobacter sp. MME-103 [BDDO]
Start position on genome 54417
End posion on genome 54328
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
cccctgacgc
tRNA gene sequence
GGAGAGGTGGCAGAGTGGTCGAATGCGGCGGTCTCGAAAACCGTTGTCGGTGTGAGCCGA
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position
ctttcccctt
Secondary structure (Cloverleaf model)
>W1610081494	Ser	CGA
                   c      GCCA ctttcccctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTCGGTGTGAGCCGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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