The detailed information of tRNA gene sequence


Sequence ID>W121006721
Genome IDAFXB01000010
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSAR116 cluster alpha proteobacterium HIMB100 [AFXB]
Start position on genome 140468
End posion on genome 140392
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtgtaatgtg
tRNA gene sequence 
GGGCCTGTAGTTCAATTGGTTAGAACCCACGGCTCATAACCGTGTTGTTGCAGGTTCGAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
tttttccccc
Secondary structure (Cloverleaf model)
>W121006721	Met	CAT
                   g      ACCA tttttccccc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | | | |     G
    T       C T T G       G C A G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        C     TTGTT
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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